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  5. AMTR_s00029p00035240

AMTR_s00029p00035240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.18

Description : Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana


Gene families : OG0021405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0021405_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00035240
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Adi_g033293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43081 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 251 297
IPR002885 Pentatricopeptide_repeat 353 399
IPR002885 Pentatricopeptide_repeat 152 183
IPR002885 Pentatricopeptide_repeat 427 451
IPR002885 Pentatricopeptide_repeat 51 81
IPR002885 Pentatricopeptide_repeat 455 484
No external refs found!