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  5. AMTR_s00028p00200060

AMTR_s00028p00200060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00028.89

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factors.AP180 clathrin assembly protein


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00028p00200060
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G03050 No alias ENTH/ANTH/VHS superfamily protein 0.18 OrthoFinder output from all 47 species
AT4G02650 No alias ENTH/ANTH/VHS superfamily protein 0.15 OrthoFinder output from all 47 species
AT5G57200 No alias ENTH/ANTH/VHS superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g015730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01890 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g14788 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g02242 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08469 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31651.t1 Aspi01Gene31651 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40710.t1 Aspi01Gene40710 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.04 OrthoFinder output from all 47 species
Ceric.04G099900.1 Ceric.04G099900 not classified & original description: pacid=50631667... 0.04 OrthoFinder output from all 47 species
Ceric.34G007000.1 Ceric.34G007000 not classified & original description: pacid=50623589... 0.02 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
Dac_g11800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.17 OrthoFinder output from all 47 species
GSVIVT01030504001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.08 OrthoFinder output from all 47 species
GSVIVT01035864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Gb_35012 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os01g50010.1 LOC_Os01g50010 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g07900.1 LOC_Os02g07900 ECA1/2 clathrin coated vesicle adaptor protein 0.11 OrthoFinder output from all 47 species
LOC_Os02g55970.1 LOC_Os02g55970 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g35160.1 LOC_Os05g35160 ECA1/2 clathrin coated vesicle adaptor protein 0.07 OrthoFinder output from all 47 species
LOC_Os06g45050.1 LOC_Os06g45050 Putative clathrin assembly protein At5g57200... 0.04 OrthoFinder output from all 47 species
Lfl_g04130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13944 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_28790V3.1 Pp3c5_28790 ENTH/ANTH/VHS superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g24836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo440070 No alias Putative clathrin assembly protein At4g02650... 0.03 OrthoFinder output from all 47 species
Solyc01g104870.3.1 Solyc01g104870 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Solyc02g043810.4.1 Solyc02g043810 ECA1/2 clathrin coated vesicle adaptor protein 0.13 OrthoFinder output from all 47 species
Solyc06g011450.3.1 Solyc06g011450 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Solyc11g044860.3.1 Solyc11g044860 ECA1/2 clathrin coated vesicle adaptor protein 0.14 OrthoFinder output from all 47 species
Solyc12g006000.1.1 Solyc12g006000 clathrin assembly protein (AP180) 0.13 OrthoFinder output from all 47 species
Solyc12g010530.3.1 Solyc12g010530 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Spa_g07378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013776_P003 Zm00001e013776 ECA1/2 clathrin coated vesicle adaptor protein 0.07 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.12 OrthoFinder output from all 47 species
Zm00001e030401_P001 Zm00001e030401 ECA1/2 clathrin coated vesicle adaptor protein 0.06 OrthoFinder output from all 47 species
Zm00001e036365_P001 Zm00001e036365 Putative clathrin assembly protein At5g35200... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 30 296
No external refs found!