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  5. AMTR_s00027p00213280

AMTR_s00027p00213280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.77

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component


Gene families : OG0005180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00213280

Target Alias Description ECC score Gene Family Method Actions
AT5G24710 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g055941 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Ala_g04924 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Als_g28919 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Ceric.33G065100.1 Ceric.33G065100 component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Cre12.g535350 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g11860 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g06508 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os01g46510.1 LOC_Os01g46510 component TWD40 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
Mp2g04690.1 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Msp_g15509 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Pir_g04477 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e020289_P001 Zm00001e020289 component TWD40 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!