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  5. AMTR_s00026p00165550

AMTR_s00026p00165550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00026.81

No description available


Gene families : OG0000815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00026p00165550

Target Alias Description ECC score Gene Family Method Actions
Aev_g27641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G034800.1 Ceric.24G034800 not classified & original description: pacid=50628912... 0.02 OrthoFinder output from all 47 species
Ceric.37G043800.1 Ceric.37G043800 not classified & original description: pacid=50616406... 0.03 OrthoFinder output from all 47 species
Ceric.37G044000.1 Ceric.37G044000 not classified & original description: pacid=50615774... 0.02 OrthoFinder output from all 47 species
Dac_g19602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003863001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_19812 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g42470.1 LOC_Os02g42470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g36795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7806654g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g01130.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016721 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023465 No alias not classified & original description: CDS=1-1044 0.03 OrthoFinder output from all 47 species
Solyc07g007130.1.1 Solyc07g007130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g48918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015798_P001 Zm00001e015798 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e032144_P001 Zm00001e032144 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!