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  5. AMTR_s00025p00245930

AMTR_s00025p00245930 (PGSIP3, GUX2,...)


Aliases : PGSIP3, GUX2, evm_27.TU.AmTr_v1.0_scaffold00025.390

Description : Cell wall.hemicellulose.xylan.synthesis.glucuronosyltransferase activities.GUX-type glucuronosyltransferase


Gene families : OG0002672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002672_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00245930
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00013040 PGSIP3, GUX2,... Cell... 0.04 OrthoFinder output from all 47 species
AT1G08990 PGSIP5 plant glycogenin-like starch initiation protein 5 0.07 OrthoFinder output from all 47 species
AT3G18660 PGSIP1, GUX1 plant glycogenin-like starch initiation protein 1 0.05 OrthoFinder output from all 47 species
AT4G33330 PGSIP3, GUX2 plant glycogenin-like starch initiation protein 3 0.05 OrthoFinder output from all 47 species
Aop_g10280 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62374 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01641 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25293 PGSIP1, GUX1 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10467 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000046001 PGSIP4 Cell... 0.03 OrthoFinder output from all 47 species
GSVIVT01009501001 PGSIP3, GUX2 Cell... 0.04 OrthoFinder output from all 47 species
GSVIVT01026525001 PGSIP1, GUX1 Cell... 0.04 OrthoFinder output from all 47 species
Gb_06192 PGSIP1, GUX1 glucuronosyltransferase (GUX) 0.07 OrthoFinder output from all 47 species
LOC_Os03g08600.1 PGSIP3, GUX2,... glucuronosyltransferase (GUX) 0.06 OrthoFinder output from all 47 species
Len_g29117 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02012 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13941 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_35705g0010 PGSIP1, GUX1 glucuronosyltransferase (GUX) 0.02 OrthoFinder output from all 47 species
MA_8597011g0010 PGSIP2, GUX3 glucuronosyltransferase (GUX) 0.02 OrthoFinder output from all 47 species
Ppi_g46456 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020308 PGSIP1, GUX1 glucuronosyltransferase *(GUX) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g35014 No alias glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098960.3.1 PGSIP4, Solyc01g098960 glucuronosyltransferase (GUX) 0.03 OrthoFinder output from all 47 species
Solyc04g078990.4.1 PGSIP3, GUX2,... glucuronosyltransferase (GUX) 0.03 OrthoFinder output from all 47 species
Solyc11g005760.3.1 PGSIP1, GUX1,... glucuronosyltransferase (GUX) 0.04 OrthoFinder output from all 47 species
Spa_g30363 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02808 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04683 PGSIP2, GUX3 glucuronosyltransferase *(GUX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014808_P002 PGSIP1, GUX1,... glucuronosyltransferase (GUX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 238 432
No external refs found!