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  5. AMTR_s00025p00237300

AMTR_s00025p00237300 (SCY2, EMB2289,...)


Aliases : SCY2, EMB2289, evm_27.TU.AmTr_v1.0_scaffold00025.355

Description : Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecY2 component


Gene families : OG0005693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00237300

Target Alias Description ECC score Gene Family Method Actions
Ceric.25G055200.1 SCY2, EMB2289,... component *(SecY2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
LOC_Os05g33020.1 SCY2, EMB2289,... component SecY2 of inner envelope Sec2 post-import... 0.04 OrthoFinder output from all 47 species
Mp1g27500.1 SCY2, EMB2289 component SecY2 of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Ore_g29035 SCY2, EMB2289 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 224 565
No external refs found!