1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00025p00203820

AMTR_s00025p00203820 (CAC2,...)


Aliases : CAC2, evm_27.TU.AmTr_v1.0_scaffold00025.261

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.biotin carboxylase subunit


Gene families : OG0001087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00203820

Target Alias Description ECC score Gene Family Method Actions
Aev_g11967 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Cba_g21594 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G002700.1 CAC2, Ceric.34G002700 EC_6.4 ligase forming carbon-carbon bond & original... 0.04 OrthoFinder output from all 47 species
Cre06.g258700 MCCA Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.01 OrthoFinder output from all 47 species
Cre08.g359350 CAC2 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.02 OrthoFinder output from all 47 species
Dde_g03392 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09434 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g16429 MCCA EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Mp6g09060.1 CAC2 biotin carboxylase subunit of polymeric acetyl-CoA... 0.02 OrthoFinder output from all 47 species
Msp_g10079 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g18071 MCCA EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g00564 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 47 species
Pnu_g08042 MCCA EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 47 species
Pp3c8_7840V3.1 CAC2, Pp3c8_7840 acetyl Co-enzyme a carboxylase biotin carboxylase subunit 0.01 OrthoFinder output from all 47 species
Solyc01g008330.4.1 CAC2, Solyc01g008330 biotin carboxylase subunit of polymeric acetyl-CoA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009432 SOS response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 397 502
IPR005481 BC-like_N 64 171
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 176 383
No external refs found!