AMTR_s00025p00120730 (GS2, ATGSL1, GLN2,...)

Aliases : GS2, ATGSL1, GLN2, evm_27.TU.AmTr_v1.0_scaffold00025.110

Description : Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase

Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00025p00120730

Target	Alias	Description	ECC score	Gene Family Method
AT1G66200	ATGSR2, GLN1;2, GSR2	glutamine synthase clone F11	0.04	OrthoFinder output from all 47 species
AT5G37600	ATGSR1, GLN1;1,...	glutamine synthase clone R1	0.03	OrthoFinder output from all 47 species
Adi_g004718	ATGSR1, GLN1;1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g09560	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.05	OrthoFinder output from all 47 species
Als_g27443	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Als_g39003	ATGSR2, GLN1;2, GSR2	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene16666.t1	GLN1;4, Aspi01Gene16666	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene53323.t1	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0008.g011642	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Ceric.21G070700.1	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
Len_g44821	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Lfl_g11416	GLN1;4	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Lfl_g26898	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
MA_15508g0010	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.02	OrthoFinder output from all 47 species
Mp5g13580.1	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.03	OrthoFinder output from all 47 species
Mp6g15560.1	GLN1;4	Glutamine synthetase cytosolic isozyme 1-1 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Msp_g39888	ATGSR1, GLN1;1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g08935	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
Ppi_g05089	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.02	OrthoFinder output from all 47 species
Spa_g39139	ATGSR1, GLN1;1,...	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Zm00001e000880_P002	ATGSR1, GLN1;1,...	Glutamine synthetase root isozyme 1 OS=Zea mays...	0.03	OrthoFinder output from all 47 species
Zm00001e005453_P003	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.03	OrthoFinder output from all 47 species
Zm00001e015749_P003	ATGSR1, GLN1;1,...	cytosolic glutamine synthetase (GLN1)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004356	glutamate-ammonia ligase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006541	glutamine metabolic process	None	Extended
BP	GO:0006542	glutamine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016211	ammonia ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016880	acid-ammonia (or amide) ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008147	Gln_synt_N	83	161
IPR008146	Gln_synth_cat_dom	168	413

External Links

No external refs found!

AMTR_s00025p00120730 (GS2, ATGSL1, GLN2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation