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  5. AMTR_s00025p00107390

AMTR_s00025p00107390 (MED33A, RFR1,...)


Aliases : MED33A, RFR1, evm_27.TU.AmTr_v1.0_scaffold00025.92

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED5/MED24/MED33 component


Gene families : OG0004136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00107390

Target Alias Description ECC score Gene Family Method Actions
Dde_g51245 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Gb_17496 MED33A, RFR1 component MED5/MED24/MED33 of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Sam_g07988 No alias component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Zm00001e031371_P001 MED33A, RFR1,... component MED5/MED24/MED33 of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!