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  5. AMTR_s00024p00252690

AMTR_s00024p00252690 (ATPPC4, PPC4,...)


Aliases : ATPPC4, PPC4, evm_27.TU.AmTr_v1.0_scaffold00024.351

Description : Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate (PEP) carboxylase activity.PEP carboxylase


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00252690

Target Alias Description ECC score Gene Family Method Actions
Aop_g10567 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g171950 ATPPC4, PPC4 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
Cre16.g673852 PEPC1, ATPEPC1,... Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
Len_g30934 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_20154g0010 PPC2, ATPPC2 Phosphoenolpyruvate carboxylase OS=Picea abies... 0.02 OrthoFinder output from all 47 species
Mp1g16440.1 ATPPC4, PPC4 PEP carboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021135 PEP_COase 483 1085
IPR021135 PEP_COase 154 351
No external refs found!