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  5. AMTR_s00024p00238750

AMTR_s00024p00238750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.272

No description available


Gene families : OG0003225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00238750

Target Alias Description ECC score Gene Family Method Actions
Adi_g045229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08211.t1 Aspi01Gene08211 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0051.g031229 No alias not classified & original description: CDS=1-1167 0.04 OrthoFinder output from all 47 species
Dac_g05735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g18370.1 LOC_Os10g18370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g26183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0236.g026555 No alias not classified & original description: CDS=232-1281 0.03 OrthoFinder output from all 47 species
Smo102585 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g067050.3.1 Solyc02g067050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g09606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003774 UPF0301 87 247
No external refs found!