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  5. AMTR_s00024p00132940

AMTR_s00024p00132940 (UGE5,...)


Aliases : UGE5, evm_27.TU.AmTr_v1.0_scaffold00024.79

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00132940
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Adi_g067957 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15409 ATUGE1, UGE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g04690.1 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.03 OrthoFinder output from all 47 species
Msp_g12932 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17023 No alias EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38451 No alias EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00852 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004258_P001 UGE5, Zm00001e004258 UDP-D-glucose 4-epimerase 0.04 OrthoFinder output from all 47 species
Zm00001e009687_P003 UGE5, Zm00001e009687 UDP-D-glucose 4-epimerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0044237 cellular metabolic process IEA Interproscan
MF GO:0050662 obsolete coenzyme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003995 acyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0052890 oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 5 267
No external refs found!