AMTR_s00023p00244390 (GLR2.7, ATGLR2.7,...)

Aliases : GLR2.7, ATGLR2.7, evm_27.TU.AmTr_v1.0_scaffold00023.215

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00023p00244390

Target	Alias	Description	ECC score	Gene Family Method
AT3G04110	ATGLR1.1, GLR1.1, GLR1	glutamate receptor 1.1	0.03	OrthoFinder output from all 47 species
AT3G07520	GLR1.4, ATGLR1.4	glutamate receptor 1.4	0.03	OrthoFinder output from all 47 species
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.04	OrthoFinder output from all 47 species
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.02	OrthoFinder output from all 47 species
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.04	OrthoFinder output from all 47 species
Aev_g29888	GLR2.8, ATGLR2.8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26986	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11479	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22376	ATGLR3.1, GLR2,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22573	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06276	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07459	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g10462	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21648	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g63126	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65112.t1	GLR3.3,...	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0038.g026130	ATGLR2.9, GLR2.9	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0038.g026158	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Cba_g32439	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g76037	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.01G008100.1	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.01G008500.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G069800.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.18G064700.1	GLR3.3,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.23G024000.1	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original...	0.05	OrthoFinder output from all 47 species
Ehy_g02879	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19579	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g20777	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01033129001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
Gb_16129	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_16317	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_20613	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_39754	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
LOC_Os02g54640.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
LOC_Os06g09050.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
LOC_Os07g01310.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
LOC_Os09g31160.1	GLR3.3,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Len_g24226	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g28228	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10430853g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_354015g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
MA_37580g0010	ATGLR3.1, GLR2,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_6222576g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
Msp_g32213	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g41082	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16585	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g34592	No alias	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Smo166047	GLR3.3, ATGLR3.3	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
Spa_g09957	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g25033	GLUR3, GLR3.4, ATGLR3.4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009847_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	IEA	Interproscan
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	None	Extended
MF	GO:0005231	excitatory extracellular ligand-gated monoatomic ion channel activity	None	Extended
MF	GO:0005234	extracellularly glutamate-gated ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	Interproscan
MF	GO:0008066	glutamate receptor activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0030288	outer membrane-bounded periplasmic space	IEA	Interproscan
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
CC	GO:0042597	periplasmic space	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0004806	triglyceride lipase activity	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	43	387
IPR001320	Iontro_rcpt_C	575	829
IPR001638	Solute-binding_3/MltF_N	475	797

External Links

No external refs found!

AMTR_s00023p00244390 (GLR2.7, ATGLR2.7,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation