AMTR_s00023p00221340 (APRR7, PRR7,...)

Aliases : APRR7, PRR7, evm_27.TU.AmTr_v1.0_scaffold00023.165

Description : Multi-process regulation.circadian clock.PRR time-of-day-dependent expressed repressor

Gene families : OG0001140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001140_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00023p00221340

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022145	APRR9, TL1, PRR9	circAdian clock time-of-day-dependent expressed...	0.02	OrthoFinder output from all 47 species
Aev_g15277	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Aev_g35567	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.02	OrthoFinder output from all 47 species
Aob_g12531	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Aspi01Gene40465.t1	PRR3, APRR3,...	circadian clock time-of-day-dependent expressed...	0.02	OrthoFinder output from all 47 species
Aspi01Gene40465.t2	PRR3, APRR3,...	circadian clock time-of-day-dependent expressed...	0.02	OrthoFinder output from all 47 species
Azfi_s0269.g061135	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.04	OrthoFinder output from all 47 species
Cba_g16099	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.05	OrthoFinder output from all 47 species
Ceric.03G051500.1	Ceric.03G051500	not classified & original description: pacid=50573008...	0.04	OrthoFinder output from all 47 species
Dcu_g14891	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Dde_g18363	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.02	OrthoFinder output from all 47 species
GSVIVT01025087001	APRR7, PRR7	Two-component response regulator-like APRR7...	0.05	OrthoFinder output from all 47 species
LOC_Os09g36220.1	APRR5, PRR5,...	PRR circadian clock time-of-day-dependent expressed repressor	0.04	OrthoFinder output from all 47 species
Len_g29866	PRR3, APRR3	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Len_g37809	APRR7, PRR7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g49694	APRR5, PRR5	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Len_g54722	APRR7, PRR7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09938	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Nbi_g31775	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.03	OrthoFinder output from all 47 species
Ore_g13226	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g02346	APRR7, PRR7	circadian clock time-of-day-dependent expressed...	0.04	OrthoFinder output from all 47 species
Solyc03g081240.3.1	APRR5, PRR5,...	PRR circadian clock time-of-day-dependent expressed repressor	0.06	OrthoFinder output from all 47 species
Solyc10g086000.3.1	APRR7, PRR7,...	PRR circadian clock time-of-day-dependent expressed repressor	0.07	OrthoFinder output from all 47 species
Spa_g10370	PRR3, APRR3	circadian clock time-of-day-dependent expressed...	0.04	OrthoFinder output from all 47 species
Zm00001e009095_P004	APRR5, PRR5,...	PRR circadian clock time-of-day-dependent expressed repressor	0.03	OrthoFinder output from all 47 species
Zm00001e010231_P002	APRR5, PRR5,...	PRR circadian clock time-of-day-dependent expressed repressor	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	730	773
IPR001789	Sig_transdc_resp-reg_receiver	101	212

External Links

No external refs found!

AMTR_s00023p00221340 (APRR7, PRR7,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation