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  5. AMTR_s00023p00095420

AMTR_s00023p00095420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.47

Description : Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade E phosphatase


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00095420

Target Alias Description ECC score Gene Family Method Actions
AT1G03590 No alias Protein phosphatase 2C family protein 0.05 OrthoFinder output from all 47 species
Adi_g022167 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085315 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g127807 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39385 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18946 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26108.t1 Aspi01Gene26108 clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G041000.1 Ceric.18G041000 clade E phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G023200.1 Ceric.34G023200 clade E phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G068300.1 Ceric.37G068300 clade E phosphatase & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000940.4 No alias Probable protein phosphatase 2C 65 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Cre06.g278260 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04762 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09330 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14835 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019076001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
LOC_Os02g13100.1 LOC_Os02g13100 clade E phosphatase 0.04 OrthoFinder output from all 47 species
LOC_Os05g29030.1 LOC_Os05g29030 clade E phosphatase 0.03 OrthoFinder output from all 47 species
Len_g22736 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04828 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29588 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33957 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47402 No alias clade E phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08564 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003352 No alias clade E phosphatase & original description: CDS=1-1275 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007382 No alias not classified & original description: CDS=747-2060 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023656 No alias clade E phosphatase & original description: CDS=1-1593 0.03 OrthoFinder output from all 47 species
Sam_g38601 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 34 300
No external refs found!