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  5. AMTR_s00023p00093390

AMTR_s00023p00093390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.46

No description available


Gene families : OG0001013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00093390
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT5G01710 No alias methyltransferases 0.05 OrthoFinder output from all 47 species
Adi_g061185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17239 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24273.t1 Aspi01Gene24273 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g00907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024625001 No alias Solute transport.carrier-mediated transport.CPA... 0.06 OrthoFinder output from all 47 species
Gb_05174 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_90879g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Nbi_g03018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g111620.1.1 Solyc03g111620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g014120.1.1 Solyc05g014120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g015040.1.1 Solyc09g015040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g07931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032054_P001 Zm00001e032054 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035937_P001 Zm00001e035937 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 146 194
IPR006342 FkbM_mtfrase 315 458
No external refs found!