AMTR_s00022p00216890 (SLIM1, ATSLIM,...)


Aliases : SLIM1, ATSLIM, AtEIL3, EIL3, evm_27.TU.AmTr_v1.0_scaffold00022.260

Description : RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor


Gene families : OG0000587 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000587_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00216890

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00117410 EIL1, AtEIL1,... RNA biosynthesis.transcriptional activation.EIL... 0.03 OrthoFinder output from all 47 species
AT1G73730 SLIM1, ATSLIM,... ETHYLENE-INSENSITIVE3-like 3 0.02 OrthoFinder output from all 47 species
Adi_g018890 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07885 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11741 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11604.t1 EIL1, AtEIL1,... EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23302.t1 AtEIN3, EIN3,... EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11322 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44316 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59746 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G112500.1 EIL1, AtEIL1,... EIL-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G041000.1 EIL1, AtEIL1,... EIL-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g32547 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26339 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025324001 SLIM1, ATSLIM,... RNA biosynthesis.transcriptional activation.EIL... 0.04 OrthoFinder output from all 47 species
GSVIVT01037473001 AtEIN3, EIN3 RNA biosynthesis.transcriptional activation.EIL... 0.03 OrthoFinder output from all 47 species
Gb_36016 AtEIN3, EIN3 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.03 OrthoFinder output from all 47 species
LOC_Os03g20790.1 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.03 OrthoFinder output from all 47 species
LOC_Os07g48630.1 EIL1, AtEIL1,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.08 OrthoFinder output from all 47 species
LOC_Os09g31400.1 SLIM1, ATSLIM,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Lfl_g03329 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_52817g0010 AtEIN3, EIN3 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.04 OrthoFinder output from all 47 species
MA_53004g0010 EIL1, AtEIL1 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.03 OrthoFinder output from all 47 species
Msp_g20729 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03659 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15420 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17250 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45358 SLIM1, ATSLIM,... EIL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06942 AtEIN3, EIN3 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g006650.2.1 SLIM1, ATSLIM,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Solyc01g096810.3.1 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Solyc04g054840.1.1 Solyc04g054840 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Solyc06g073730.2.1 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Spa_g19385 EIL1, AtEIL1 EIL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001522_P001 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.07 OrthoFinder output from all 47 species
Zm00001e022791_P001 Zm00001e022791 EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Zm00001e034536_P001 SLIM1, ATSLIM,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.02 OrthoFinder output from all 47 species
Zm00001e035899_P001 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.03 OrthoFinder output from all 47 species
Zm00001e038277_P001 AtEIN3, EIN3,... EIN3-type ethylene signal transducer. transcription factor (EIL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0003933 GTP cyclohydrolase activity IEP HCCA
MF GO:0003935 GTP cyclohydrolase II activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0017003 protein-heme linkage IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA

No InterPro domains available for this sequence

No external refs found!