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  5. AMTR_s00022p00146680

AMTR_s00022p00146680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00022.142

Description : Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.TRAPP-C11 component


Gene families : OG0005459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00146680

Target Alias Description ECC score Gene Family Method Actions
Aev_g29595 No alias component *(TRAPPC11) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.20G020700.1 Ceric.20G020700 component *(TRAPPC11) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species
Msp_g14053 No alias component *(TRAPPC11) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g19718 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g11013 No alias component *(TRAPPC11) of TRAPP complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015266 No alias component *(TRAPPC11) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species
Smo100366 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR012880 Gryzun 589 1136
IPR021773 TPC11 254 527
No external refs found!