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  5. AMTR_s00022p00067280

AMTR_s00022p00067280 (CML38,...)


Aliases : CML38, evm_27.TU.AmTr_v1.0_scaffold00022.47

Description : Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica


Gene families : OG0008741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00022p00067280
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G76650 CML38 calmodulin-like 38 0.14 OrthoFinder output from all 47 species
AT3G01830 No alias Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
AT5G42380 CML39, CML37 calmodulin like 37 0.06 OrthoFinder output from all 47 species
GSVIVT01010378001 APC1, PC1 Probable calcium-binding protein CML31 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
GSVIVT01010379001 CML38 Probable calcium-binding protein CML31 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
GSVIVT01010380001 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
GSVIVT01010385001 CML41 Putative calcium-binding protein CML19 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
GSVIVT01019035001 CML41 Probable calcium-binding protein CML41 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g72530.1 LOC_Os01g72530 Probable calcium-binding protein CML31 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
LOC_Os11g01390.1 LOC_Os11g01390 Probable calcium-binding protein CML25/26 OS=Oryza... 0.04 OrthoFinder output from all 47 species
LOC_Os12g01400.1 LOC_Os12g01400 Probable calcium-binding protein CML25/26 OS=Oryza... 0.06 OrthoFinder output from all 47 species
Pir_g24666 CML39, CML37 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29005 CML41 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g094000.1.1 CML39, CML37,... Putative calcium-binding protein CML19 OS=Oryza sativa... 0.11 OrthoFinder output from all 47 species
Solyc03g005040.1.1 CML39, CML37,... Probable calcium-binding protein CML31 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Solyc06g073830.1.1 Solyc06g073830 Putative calcium-binding protein CML19 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Solyc11g071740.2.1 CML38, Solyc11g071740 Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc11g071750.2.1 CML39, CML37,... Calcium-binding protein CML37 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc11g071760.3.1 CML39, CML37,... Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e028302_P001 Zm00001e028302 Putative calcium-binding protein CML19 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 89 146
No external refs found!