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  5. AMTR_s00021p00227450

AMTR_s00021p00227450 (GMI1,...)


Aliases : GMI1, evm_27.TU.AmTr_v1.0_scaffold00021.222

Description : Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana


Gene families : OG0001616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00227450

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene71877.t1 GMI1, Aspi01Gene71877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14127 GMI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26875 GMI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04064 GMI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038554001 IDN1, DMS3 Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
Pp3c22_17807V3.1 GMI1, Pp3c22_17807 gamma-irradiation and mitomycin c induced 1 0.02 OrthoFinder output from all 47 species
Solyc03g071810.1.1 Solyc03g071810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g083170.3.1 IDN1, DMS3,... component DMS3 of DNA methylation accessory complex (DDR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008409 5'-3' exonuclease activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!