Sequence Description Alias PCC hrr AMTR_s00038p00132760 Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.77 0.9269976466959998 3 AMTR_s00040p00044580 evm_27.TU.AmTr_v1.0_scaffold00040.21 0.9249682965789711 2 AMTR_s00066p00189300 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UPT6 assembly factor evm_27.TU.AmTr_v1.0_scaffold00066.240 0.9222188148962194 3 AMTR_s00021p00231680 Amino acid metabolism.biosynthesis.glutamate family.histidine.bifunctional phosphoribosyl-ATP diphosphatase and phosphoribosyl-AMP cyclohydrolase HISN2, AT-IE, evm_27.TU.AmTr_v1.0_scaffold00021.229 0.9172187997185188 4 AMTR_s00161p00047190 RNA biosynthesis.transcriptional activation.E2F/DP transcription factor ATDPB, DPB, evm_27.TU.AmTr_v1.0_scaffold00161.13 0.9102670425198813 5 AMTR_s00003p00149890 DNA damage response.DNA repair mechanisms.base excision repair (BER).flap structure-specific endonuclease (FEN1) evm_27.TU.AmTr_v1.0_scaffold00003.122 0.9082526267666621 17 AMTR_s00010p00239860 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.300 0.906069125607738 7 AMTR_s00026p00029620 DRS1, evm_27.TU.AmTr_v1.0_scaffold00026.7 0.905121134503184 8 AMTR_s00032p00060700 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana RBL, evm_27.TU.AmTr_v1.0_scaffold00032.38 0.8974702464063165 9 AMTR_s00066p00035120 Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase evm_27.TU.AmTr_v1.0_scaffold00066.11 0.895807155078101 19 AMTR_s00166p00033890 Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00166.16 0.8923448729107231 78 AMTR_s00049p00182420 DNA damage response.DNA repair mechanisms.base excision repair (BER).apurinic/apyrimidinic (AP) endonuclease activities.APE1 AP-endonuclease evm_27.TU.AmTr_v1.0_scaffold00049.177 0.8910476241410972 13 AMTR_s00006p00264510 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB5 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00006.267 0.8884428005868527 78 AMTR_s00164p00020970 Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00164.3 0.8868650564742279 15 AMTR_s00039p00237910 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component SUVR4, SDG31, evm_27.TU.AmTr_v1.0_scaffold00039.230 0.8855231218551831 16 AMTR_s00047p00138210 TMV resistance protein N OS=Nicotiana glutinosa 0.8853002709818404 17 AMTR_s00012p00230440 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein RDM12, IDN2, evm_27.TU.AmTr_v1.0_scaffold00012.185 0.8847153390969832 18 AMTR_s00066p00202260 Cell cycle.organelle machineries.DNA replication.RNA primer removal.mitochondrial exonuclease evm_27.TU.AmTr_v1.0_scaffold00066.273 0.8845431091204105 20 AMTR_s00114p00120500 evm_27.TU.AmTr_v1.0_scaffold00114.53 0.882890284870869 22 AMTR_s00013p00187300 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.subcluster B phosphatase SSP5, evm_27.TU.AmTr_v1.0_scaffold00013.118 0.8825452234664135 23 AMTR_s00056p00110240 Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.82 0.8813376595011343 63 AMTR_s00099p00130090 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor HVE, TIP120, CAND1, ATCAND1, ETA2, evm_27.TU.AmTr_v1.0_scaffold00099.116 0.8804652700490929 64 AMTR_s00010p00224530 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.247 0.8798992385114683 26 AMTR_s00010p00262680 GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.475 0.8795589696728522 27 AMTR_s00068p00078600 Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.36 0.8785933951183834 28 AMTR_s00108p00150280 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.P58 Hsp70-co-chaperone ATP58IPK, P58IPK, evm_27.TU.AmTr_v1.0_scaffold00108.50 0.8781300708293304 39 AMTR_s00024p00239810 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.BOP1 component evm_27.TU.AmTr_v1.0_scaffold00024.276 0.875172032528875 31 AMTR_s00066p00059340 evm_27.TU.AmTr_v1.0_scaffold00066.34 0.8745746183463752 32 AMTR_s00081p00125870 evm_27.TU.AmTr_v1.0_scaffold00081.45 0.8741073902743656 95 AMTR_s00067p00076570 Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.51 0.8738894424341969 34 AMTR_s03531p00004900 Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold03531.1 0.872765431547326 37 AMTR_s00057p00175300 Protein trichome birefringence-like 13 OS=Arabidopsis thaliana TBL13, evm_27.TU.AmTr_v1.0_scaffold00057.184 0.8715914525490434 38 AMTR_s00071p00094030 MEE21, evm_27.TU.AmTr_v1.0_scaffold00071.69 0.8706186735751931 49 AMTR_s00082p00120830 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate phosphatase HISN7, IMPL2, evm_27.TU.AmTr_v1.0_scaffold00082.25 0.8701485311091702 40 AMTR_s00088p00121830 DNA damage response.DNA repair polymerase activities.DNA polymerase lambda evm_27.TU.AmTr_v1.0_scaffold00088.88 0.8685097839643422 42 AMTR_s00080p00032690 Cell cycle.interphase.DNA replication.initiation.MCM8-9 auxiliary complex.MCM8 component MCM8, evm_27.TU.AmTr_v1.0_scaffold00080.7 0.8682498783802974 43 AMTR_s00045p00160070 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase evm_27.TU.AmTr_v1.0_scaffold00045.179 0.8671403774978294 98 AMTR_s00010p00244300 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.320 0.8669835352957788 47 AMTR_s00010p00261260 Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.452 0.8666024765863745 48 AMTR_s00061p00127300 Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana MEF22, evm_27.TU.AmTr_v1.0_scaffold00061.103 0.8653005040722631 49 AMTR_s00066p00170330 Pentatricopeptide repeat-containing protein At3g02650, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.198 0.8649193791607171 52 AMTR_s00001p00194960 evm_27.TU.AmTr_v1.0_scaffold00001.195 0.8641149053777162 53 AMTR_s00032p00147450 Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.113 0.8626962368765547 55 AMTR_s00052p00069760 DExH-box ATP-dependent RNA helicase DExH12 OS=Arabidopsis thaliana emb1507, evm_27.TU.AmTr_v1.0_scaffold00052.11 0.861137651838654 57 AMTR_s00040p00167920 evm_27.TU.AmTr_v1.0_scaffold00040.143 0.8608931763430115 58 AMTR_s00032p00147070 Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.112 0.8604314239006807 59 AMTR_s00019p00126240 evm_27.TU.AmTr_v1.0_scaffold00019.105 0.8595283935115375 61 AMTR_s00069p00092600 Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana RPD1, evm_27.TU.AmTr_v1.0_scaffold00069.57 0.8581815883638209 62 AMTR_s00025p00240500 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.366 0.8577187132784296 63 AMTR_s00069p00131410 U-box domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.93 0.8563212539282318 64 AMTR_s00001p00244940 Protein S-acyltransferase 10 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.290 0.856100731534797 65 AMTR_s00016p00168950 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor HSS, ARF1-BP, ARF2, ORE14, evm_27.TU.AmTr_v1.0_scaffold00016.128 0.8557195032691172 67 AMTR_s00129p00124210 RNA biosynthesis.transcriptional activation.bHLH transcription factor LRL1, evm_27.TU.AmTr_v1.0_scaffold00129.99 0.8555102857264034 71 AMTR_s00011p00263440 Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.203 0.8548110890167068 82 AMTR_s00165p00047580 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.PRONE-type exchange factor ROPGEF7, ATROPGEF7, evm_27.TU.AmTr_v1.0_scaffold00165.27 0.8521904733302632 76 AMTR_s00008p00104700 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component SUVH5, SGD9, evm_27.TU.AmTr_v1.0_scaffold00008.39 0.8516966515073267 79 AMTR_s00006p00260320 Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.221 0.8516181744489445 80 AMTR_s00002p00147770 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.DRP1-type dynamin EDR3, ADLP2, DRP1E, ADL4, ADL1E, DL1E, evm_27.TU.AmTr_v1.0_scaffold00002.113 0.8487986955464818 82 AMTR_s00045p00136300 Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.137 0.846812247633641 84 AMTR_s00099p00152510 Protein STICHEL OS=Arabidopsis thaliana STI, evm_27.TU.AmTr_v1.0_scaffold00099.143 0.8467930464135702 85 AMTR_s00030p00140460 evm_27.TU.AmTr_v1.0_scaffold00030.89 0.8457029316470801 87 AMTR_s00006p00254180 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) evm_27.TU.AmTr_v1.0_scaffold00006.176 0.8452226476653558 89 AMTR_s00081p00064980 DNA damage response.BRCC DNA-damage response complex.BRCC36 component AtBRCC36A, BRCC36A, evm_27.TU.AmTr_v1.0_scaffold00081.22 0.8441322909639013 90 AMTR_s00010p00250780 External stimuli response.biotic stress.pathogen effector.NLR effector receptor evm_27.TU.AmTr_v1.0_scaffold00010.356 0.8431827367580917 93 AMTR_s00061p00213950 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase TRM10, AtTRM, evm_27.TU.AmTr_v1.0_scaffold00061.266 0.8431073835084941 100 AMTR_s00071p00116490 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1b/FAS2 component NFB01, NFB1, MUB3.9, FAS2, evm_27.TU.AmTr_v1.0_scaffold00071.91 0.8417373962780667 96