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  5. AMTR_s00021p00227090

AMTR_s00021p00227090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.221

No description available


Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00227090
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G64700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G71015 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G37840 No alias BEST Arabidopsis thaliana protein match is: plastid... 0.04 OrthoFinder output from all 47 species
Als_g15299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53653.t1 Aspi01Gene53653 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14591 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019671001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_33936 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33937 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g33210.1 LOC_Os08g33210 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g25690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10882g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_140980g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_16509g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_568302g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_91700g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g03903 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g45729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026155 No alias not classified & original description: CDS=1-780 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026156 No alias not classified & original description: CDS=1-708 0.05 OrthoFinder output from all 47 species
Solyc05g008220.4.1 At17.1, Solyc05g008220 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e015734_P001 Zm00001e015734 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034082_P002 Zm00001e034082 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036745_P001 Zm00001e036745 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 169
No external refs found!