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  5. AMTR_s00021p00105410

AMTR_s00021p00105410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00021.53

Description : RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor


Gene families : OG0010925 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00105410

Target Alias Description ECC score Gene Family Method Actions
AT3G15000 No alias cobalt ion binding 0.03 OrthoFinder output from all 47 species
GSVIVT01014223001 No alias RNA processing.organelle machineries.RNA... 0.06 OrthoFinder output from all 47 species
Gb_00162 No alias RNA editing factor (MORF) 0.04 OrthoFinder output from all 47 species
LOC_Os09g33480.1 LOC_Os09g33480 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
MA_10430373g0010 No alias RNA editing factor (MORF) 0.06 OrthoFinder output from all 47 species
Solyc10g007180.2.1 Solyc10g007180 RNA editing factor (MORF) 0.06 OrthoFinder output from all 47 species
Solyc12g014230.2.1 Solyc12g014230 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
Zm00001e038884_P001 Zm00001e038884 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015093 ferrous iron transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!