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  5. AMTR_s00021p00090840

AMTR_s00021p00090840 (SBP1,...)


Aliases : SBP1, evm_27.TU.AmTr_v1.0_scaffold00021.40

Description : Selenium-binding protein 1 OS=Arabidopsis thaliana


Gene families : OG0004163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00021p00090840

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z244500.1 SBP2, EDA38,... not classified & original description: pacid=50606320... 0.04 OrthoFinder output from all 47 species
Gb_32916 SBP1 Selenium-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68770.1 SBP1, LOC_Os01g68770 Selenium-binding protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e018852_P002 SBP2, EDA38,... Selenium-binding protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008430 selenium binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR008826 Se-bd 30 495
No external refs found!