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  5. AMTR_s00020p00186610

AMTR_s00020p00186610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00020.71

Description : Pirin-like protein OS=Solanum lycopersicum


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00020p00186610

Target Alias Description ECC score Gene Family Method Actions
AT1G50590 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43120 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.04 OrthoFinder output from all 47 species
Ala_g21819 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
Aop_g55113 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012617 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.65 No alias Pirin-like protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
GSVIVT01031671001 No alias Pirin-like protein OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
GSVIVT01037758001 No alias Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Gb_07514 No alias Pirin-like protein OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Gb_16040 No alias Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62790.1 LOC_Os03g62790 Pirin-like protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Pnu_g12267 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Solyc09g098180.4.1 Solyc09g098180 Pirin-like protein OS=Solanum lycopersicum... 0.09 OrthoFinder output from all 47 species
Spa_g25433 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Tin_g20844 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e025778_P001 Zm00001e025778 Pirin-like protein OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Zm00001e034512_P001 Zm00001e034512 Pirin-like protein At1g50590 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003829 Pirin_N_dom 30 124
IPR008778 Pirin_C_dom 177 282
No external refs found!