Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.375
Description : Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana
Gene families : OG0001619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001619_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g084107 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g51662 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g08614 | RHD3 | ER tubulae formation factor *(RHD3/RL) & original... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g39310.1 | RHD3, LOC_Os01g39310 | ER tubulae formation factor (RHD3/RL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g41170.1 | LOC_Os12g41170 | ER tubulae formation factor (RHD3/RL) | 0.03 | OrthoFinder output from all 47 species | |
MA_10428984g0020 | RHD3 | ER tubulae formation factor (RHD3/RL) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g26149 | RHD3 | ER tubulae formation factor *(RHD3/RL) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g01679 | No alias | ER tubulae formation factor *(RHD3/RL) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020502_P002 | RHD3, Zm00001e020502 | ER tubulae formation factor (RHD3/RL) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0004047 | aminomethyltransferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008803 | RHD3/Sey1 | 43 | 763 |
No external refs found! |