1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00019p00232450

AMTR_s00019p00232450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.321

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00232450
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 OrthoFinder output from all 47 species
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G78080 RAP2.4 related to AP2 4 0.04 OrthoFinder output from all 47 species
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 OrthoFinder output from all 47 species
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 OrthoFinder output from all 47 species
Aev_g24731 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34763 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Ala_g09848 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g32688 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g21812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48728 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g59906 ERF110 subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22889 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g32568 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08977 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aop_g09282 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aop_g30341 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37207 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38416 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g39294 tny not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02794.t1 RAP2.11, Aspi01Gene02794 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03221.t1 DEAR3, Aspi01Gene03221 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04813.t1 DEAR1, CEJ1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07513.t1 Aspi01Gene07513 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29677.t1 PUCHI, Aspi01Gene29677 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70905.t1 Aspi01Gene70905 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001536 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0263.g060857 LEP subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0528.g075769 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g13066 No alias subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G030800.1 Ceric.11G030800 subgroup ERF-I transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.13G080300.1 Ceric.13G080300 subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g14879 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17233 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g27846 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dcu_g33023 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17722 RAP2.6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12089 RAP2.12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15810 HRE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17211 DREB2A, DREB2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_26662 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g09650.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g38090.1 ESR1, DRN, LOC_Os02g38090 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g34970.1 ERF110, LOC_Os04g34970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g44670.1 LOC_Os04g44670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46410.1 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g34730.1 LOC_Os05g34730 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g22730.1 ERF1, ATERF1,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g42510.1 RAP2.12, LOC_Os07g42510 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os11g13840.1 tny, LOC_Os11g13840 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Len_g38064 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03871 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Lfl_g06043 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_15496g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.05 OrthoFinder output from all 47 species
MA_225124g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_9260020g0010 SHN3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g20040.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 OrthoFinder output from all 47 species
Msp_g03932 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g14031 ATERF4, RAP2.5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24887 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g25672 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03495 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pir_g51434 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006104 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008166 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012223 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo69413 DEAR3 Ethylene-responsive transcription factor ERF037... 0.02 OrthoFinder output from all 47 species
Solyc02g077840.2.1 ATERF12, ERF12,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc04g012050.3.1 ABR1, Solyc04g012050 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g052050.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g56350 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g13240 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Tin_g21433 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g26947 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Zm00001e000608_P002 Rap2.6L, Zm00001e000608 Ethylene-responsive transcription factor ERF073... 0.03 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e025999_P001 Zm00001e025999 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e026192_P001 HRE2, Zm00001e026192 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Zm00001e032483_P001 Zm00001e032483 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Zm00001e041533_P001 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 11 59
No external refs found!