AMTR_s00019p00200890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.234

Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00200890

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00199400 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00199860 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00174680 evm_27.TU.AmTr_v1... STS14 protein OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.02 OrthoFinder output from all 47 species
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 OrthoFinder output from all 47 species
AT2G19990 PR-1-LIKE pathogenesis-related protein-1-like 0.09 OrthoFinder output from all 47 species
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 OrthoFinder output from all 47 species
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
Ala_g20678 PR-1-LIKE CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21397 No alias CAPE precursor polypeptide & original description: none 0.07 OrthoFinder output from all 47 species
Als_g04794 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14794.t1 Aspi01Gene14794 CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71537.t1 Aspi01Gene71537 CAPE precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0203.g057643 No alias CAPE precursor polypeptide & original description: CDS=1-501 0.04 OrthoFinder output from all 47 species
Cba_g05029 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06229 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G062700.1 Ceric.18G062700 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G027800.1 Ceric.25G027800 CAPE precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G027900.1 Ceric.25G027900 CAPE precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G028000.1 Ceric.25G028000 CAPE precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G028300.1 PR-1-LIKE,... CAPE precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g25605 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08251 No alias CAPE precursor polypeptide & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g08900 No alias CAPE precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19657 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01003762001 No alias STS14 protein OS=Solanum tuberosum 0.06 OrthoFinder output from all 47 species
GSVIVT01025577001 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
GSVIVT01036993001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_16215 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54530.1 LOC_Os02g54530 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54540.1 LOC_Os02g54540 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54560.1 LOC_Os02g54560 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54570.1 LOC_Os02g54570 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03467.1 LOC_Os07g03467 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03580.1 LOC_Os07g03580 Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03590.1 LOC_Os07g03590 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03600.1 LOC_Os07g03600 Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03610.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03710.1 LOC_Os07g03710 Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os10g11500.1 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os12g43700.1 LOC_Os12g43700 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
Len_g34865 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
MA_10356677g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
MA_10392069g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Msp_g00306 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02307 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08110 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38284 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59472 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c25_120V3.1 Pp3c25_120 CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.01 OrthoFinder output from all 47 species
Ppi_g05598 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003946 No alias CAPE precursor polypeptide & original description: CDS=679-1212 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023422 No alias CAPE precursor polypeptide & original description: CDS=1-525 0.03 OrthoFinder output from all 47 species
Smo230161 PRB1, ATPRB1 Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.02 OrthoFinder output from all 47 species
Solyc01g106640.2.1 Solyc01g106640 Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
Solyc02g065470.1.1 Solyc02g065470 STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.02 OrthoFinder output from all 47 species
Tin_g32203 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41417 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
Zm00001e016074_P001 Zm00001e016074 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 89 209
No external refs found!