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  5. AMTR_s00019p00156260

AMTR_s00019p00156260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00019.147

Description : Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter


Gene families : OG0000055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00019p00156260
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Als_g19290 ATKT4, KUP3, ATKUP3 potassium cation transporter *(HAK/KUP/KT) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48479.t1 HAK5, ATHAK5,... potassium cation transporter *(HAK/KUP/KT) & original... 0.02 OrthoFinder output from all 47 species
Len_g13290 KUP1, ATKT1P,... potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Len_g23809 KUP1, ATKT1P,... potassium cation transporter *(HAK/KUP/KT) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g27540 HAK5, ATHAK5 potassium cation transporter *(HAK/KUP/KT) & original... 0.02 OrthoFinder output from all 47 species
MA_81159g0010 TRK2, ATKT2,... potassium cation transporter (HAK/KUP/KT) 0.03 OrthoFinder output from all 47 species
Mp4g11330.1 KUP10 potassium cation transporter (HAK/KUP/KT) 0.03 OrthoFinder output from all 47 species
Pir_g13597 No alias potassium cation transporter *(HAK/KUP/KT) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g03156 No alias potassium cation transporter *(HAK/KUP/KT) & original... 0.02 OrthoFinder output from all 47 species
Spa_g20494 KUP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015079 potassium ion transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0071805 potassium ion transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR003855 K+_transporter 12 275
No external refs found!