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  5. AMTR_s00017p00249180

AMTR_s00017p00249180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.248

No description available


Gene families : OG0008389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008389_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00249180
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Aev_g03739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33646.t1 Aspi01Gene33646 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34433 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0008937 ferredoxin-NAD(P) reductase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000582 Acyl-CoA-binding_protein 18 108
No external refs found!