AMTR_s00016p00256970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.346

No description available


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00256970
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g124235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24164.t1 RD2, Aspi01Gene24164 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G013200.1 Ceric.14G013200 not classified & original description: pacid=50633294... 0.03 OrthoFinder output from all 47 species
Dac_g03033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017725001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01024846001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01035248001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_32427 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52314.1 LOC_Os02g52314 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_34981g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g17330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e016001_P001 Zm00001e016001 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028747_P001 Zm00001e028747 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 4 152
No external refs found!