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Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.324
No description available
Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00016p00254530 | |
| Cluster | HCCA: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00023p00170960 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00023p00171000 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00023p00172000 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00170840 | evm_27.TU.AmTr_v1... | Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT3G44695 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| AT5G11290 | No alias | Plant protein of unknown function (DUF247) | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g33018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58761 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22023.t1 | Aspi01Gene22023 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene57926.t1 | Aspi01Gene57926 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035820001 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035823001 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_12420 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g08120.1 | LOC_Os06g08120 | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | HCCA |
| BP | GO:0006378 | mRNA polyadenylation | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| MF | GO:0008146 | sulfotransferase activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
| BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004158 | DUF247_pln | 41 | 194 |
| No external refs found! |