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  5. AMTR_s00016p00253610

AMTR_s00016p00253610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.315

Description : Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum


Gene families : OG0000960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00253610
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253560 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00253590 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Aev_g26650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09423.t1 Aspi01Gene09423 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene38681.t1 Aspi01Gene38681 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008073 No alias not classified & original description: CDS=1-987 0.04 OrthoFinder output from all 47 species
Ceric.19G026500.1 Ceric.19G026500 not classified & original description: pacid=50575626... 0.02 OrthoFinder output from all 47 species
Dcu_g10155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034955001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
GSVIVT01035573001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
Gb_11266 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Gb_15806 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
LOC_Os04g33150.1 LOC_Os04g33150 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 OrthoFinder output from all 47 species
LOC_Os05g05920.1 LOC_Os05g05920 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
Len_g20015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g46480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432841g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Mp3g21080.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
Msp_g44480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099530.3.1 Solyc01g099530 Pentatricopeptide repeat-containing protein At5g14770,... 0.03 OrthoFinder output from all 47 species
Solyc05g053350.3.1 Solyc05g053350 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 OrthoFinder output from all 47 species
Tin_g19227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001638_P001 Zm00001e001638 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Zm00001e008268_P002 Zm00001e008268 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
Zm00001e029735_P001 Zm00001e029735 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Zm00001e040816_P001 Zm00001e040816 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!