AMTR_s00016p00253560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.313

Description : Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum


Gene families : OG0000960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00253560
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253610 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
AT1G47980 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.13 OrthoFinder output from all 47 species
Aob_g27827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31936 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g69430 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0001.g000855 No alias not classified & original description: CDS=1-1059 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026236 No alias not classified & original description: CDS=1-975 0.04 OrthoFinder output from all 47 species
Ceric.19G026400.1 Ceric.19G026400 not classified & original description: pacid=50575499... 0.03 OrthoFinder output from all 47 species
Ceric.19G026500.1 Ceric.19G026500 not classified & original description: pacid=50575626... 0.02 OrthoFinder output from all 47 species
Ceric.19G027300.1 Ceric.19G027300 not classified & original description: pacid=50576564... 0.05 OrthoFinder output from all 47 species
Dde_g46974 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01035573001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
Gb_11266 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 OrthoFinder output from all 47 species
Gb_15806 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
LOC_Os05g05920.1 LOC_Os05g05920 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.08 OrthoFinder output from all 47 species
Len_g44499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g46480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10431585g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
MA_10432841g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
MA_276729g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
Mp3g21080.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
Msp_g44480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c7_6790V3.1 Pp3c7_6790 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g09420 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g15282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo15031 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Solyc01g099530.3.1 Solyc01g099530 Pentatricopeptide repeat-containing protein At5g14770,... 0.12 OrthoFinder output from all 47 species
Solyc01g099570.4.1 Solyc01g099570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g053350.3.1 Solyc05g053350 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
Solyc09g014310.3.1 Solyc09g014310 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Spa_g46655 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g46656 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g44830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001638_P001 Zm00001e001638 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Zm00001e029735_P001 Zm00001e029735 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
Zm00001e040816_P001 Zm00001e040816 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!