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  5. AMTR_s00016p00231510

AMTR_s00016p00231510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.227

Description : Protein HVA22 OS=Hordeum vulgare


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00231510
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.03 OrthoFinder output from all 47 species
MA_62010g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Smo417586 No alias No description available 0.02 OrthoFinder output from all 47 species
Tin_g29763 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 2 80
No external refs found!