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  5. AMTR_s00016p00187060

AMTR_s00016p00187060 (ATSKL1, SKL1,...)


Aliases : ATSKL1, SKL1, evm_27.TU.AmTr_v1.0_scaffold00016.149

Description : Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase


Gene families : OG0001829 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00187060

Target Alias Description ECC score Gene Family Method Actions
AT3G26900 ATSKL1, SKL1 shikimate kinase like 1 0.03 OrthoFinder output from all 47 species
Adi_g052782 ATSKL1, SKL1 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aev_g12920 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ala_g25143 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Als_g01528 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aop_g21614 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Aspi01Gene25193.t1 SK1, ATSK1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0376.g067283 SK2, ATSK2 EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Cre10.g436350 SK1, ATSK1 Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
Dde_g07795 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
GSVIVT01033029001 ATSKL1, SKL1 Amino acid metabolism.biosynthesis.shikimate... 0.04 OrthoFinder output from all 47 species
Len_g20987 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Msp_g47623 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Nbi_g30493 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011558 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Solyc02g094420.3.1 ATSKL1, SKL1,... shikimate kinase 0.03 OrthoFinder output from all 47 species
Tin_g28701 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000623 Shikimate_kinase/TSH1 138 274
No external refs found!