AMTR_s00013p00233550 (ATCLC-B, CLC-B,...)

Aliases : ATCLC-B, CLC-B, evm_27.TU.AmTr_v1.0_scaffold00013.184

Description : Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter

Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00013p00233550
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AT3G27170	ATCLC-B, CLC-B	chloride channel B	0.05	OrthoFinder output from all 47 species
AT5G40890	CLC-A, ATCLC-A,...	chloride channel A	0.06	OrthoFinder output from all 47 species
Adi_g058458	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Aev_g05149	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Aev_g41935	ATCLC-B, CLC-B	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene39433.t1	Aspi01Gene39433	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47656.t1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0173.g055773	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Cba_g27347	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Cba_g29223	ATCLC-B, CLC-B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G016200.1	CLC-D, ATCLC-D,...	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Dac_g44574	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Dcu_g12890	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Ehy_g02844	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01023156001	ATCLC-C, CLC-C	Solute transport.carrier-mediated transport.CLC anion...	0.02	OrthoFinder output from all 47 species
LOC_Os08g20570.1	LOC_Os08g20570	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
LOC_Os12g25200.1	ATCLC-B, CLC-B,...	anion channel / anion:proton antiporter (CLC)	0.06	OrthoFinder output from all 47 species
Mp3g25240.1	ATCLC-C, CLC-C	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Msp_g37450	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Ore_g04555	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.04	OrthoFinder output from all 47 species
Ore_g09753	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.05	OrthoFinder output from all 47 species
Ore_g12404	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Ore_g32978	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Pir_g14943	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.04	OrthoFinder output from all 47 species
Pir_g16960	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Pnu_g01742	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Pnu_g30106	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Solyc01g103140.3.1	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter (CLC)	0.05	OrthoFinder output from all 47 species
Spa_g39978	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.04	OrthoFinder output from all 47 species
Zm00001e013966_P001	Zm00001e013966	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Zm00001e014846_P001	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001807	Cl-channel_volt-gated	1	414
IPR000644	CBS_dom	452	508

External Links

No external refs found!

AMTR_s00013p00233550 (ATCLC-B, CLC-B,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation