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Aliases : CLC-A, ATCLC-A, CLCA, ATCLCA, evm_27.TU.AmTr_v1.0_scaffold00013.183
Description : Chloride channel protein CLC-a OS=Arabidopsis thaliana
Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00013p00233520 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G27170 | ATCLC-B, CLC-B | chloride channel B | 0.05 | OrthoFinder output from all 47 species | |
| AT5G40890 | CLC-A, ATCLC-A,... | chloride channel A | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g005492 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g058458 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14150 | CLC-D, ATCLC-D | anion channel / anion:proton antiporter *(CLC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene39433.t1 | Aspi01Gene39433 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene47656.t1 | ATCLC-C, CLC-C,... | anion channel / anion:proton antiporter *(CLC) &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0173.g055773 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27347 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29223 | ATCLC-B, CLC-B | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G078400.1 | ATCLC-C, CLC-C,... | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44574 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g12890 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12370 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02844 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023156001 | ATCLC-C, CLC-C | Solute transport.carrier-mediated transport.CLC anion... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17660 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter (CLC) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g20570.1 | LOC_Os08g20570 | anion channel / anion:proton antiporter (CLC) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g25200.1 | ATCLC-B, CLC-B,... | anion channel / anion:proton antiporter (CLC) | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g37450 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04555 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09753 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g12404 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14943 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g16960 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g01742 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g103140.3.1 | ATCLC-C, CLC-C,... | anion channel / anion:proton antiporter (CLC) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12049 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39978 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g25650 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31338 | ATCLC-C, CLC-C | anion channel / anion:proton antiporter *(CLC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013966_P001 | Zm00001e013966 | anion channel / anion:proton antiporter (CLC) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014846_P001 | ATCLC-C, CLC-C,... | anion channel / anion:proton antiporter (CLC) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0005254 | chloride channel activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0006821 | chloride transport | IEP | HCCA |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | HCCA |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |