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  5. AMTR_s00013p00226690

AMTR_s00013p00226690 (CARB,...)


Aliases : CARB, evm_27.TU.AmTr_v1.0_scaffold00013.174

Description : Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.carbamoyl phosphate synthetase dimer.large subunit


Gene families : OG0004410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00226690

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358580 CARB Nucleotide metabolism.pyrimidines.ribonucleotide... 0.02 OrthoFinder output from all 47 species
GSVIVT01025125001 CARB Nucleotide metabolism.pyrimidines.ribonucleotide... 0.02 OrthoFinder output from all 47 species
MA_10329277g0010 CARB Carbamoyl-phosphate synthase large chain, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g52603 CARB large subunit of carbamoyl phosphate synthetase... 0.03 OrthoFinder output from all 47 species
Zm00001e027763_P001 CARB, Zm00001e027763 large subunit of carbamoyl phosphate synthetase... 0.03 OrthoFinder output from all 47 species
Zm00001e042225_P001 CARB, Zm00001e042225 large subunit of carbamoyl phosphate synthetase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 208 415
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 766 970
IPR005481 BC-like_N 86 203
IPR005481 BC-like_N 638 734
IPR005480 CarbamoylP_synth_lsu_oligo 505 627
IPR011607 MGS-like_dom 1053 1137
No external refs found!