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  5. AMTR_s00013p00223970

AMTR_s00013p00223970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.160

Description : F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00223970
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00255050 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT5G40680 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g056279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04628 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g06805 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g05093 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g31151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00944 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g04654 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e012830_P001 Zm00001e012830 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023895_P005 Zm00001e023895 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!