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  5. AMTR_s00013p00218260

AMTR_s00013p00218260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.154

Description : Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00013p00218260

Target Alias Description ECC score Gene Family Method Actions
Ala_g01948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08390 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.03 OrthoFinder output from all 47 species
Ore_g01332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012274 EDA5 not classified & original description: CDS=1-1467 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 41 357
No external refs found!