AMTR_s00013p00179280 (ATTSO2, TSO2,...)

Aliases : ATTSO2, TSO2, evm_27.TU.AmTr_v1.0_scaffold00013.103

Description : Nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase dimer.small subunit

Gene families : OG0001999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001999_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00013p00179280
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AT3G27060	ATTSO2, TSO2	Ferritin/ribonucleotide reductase-like family protein	0.03	OrthoFinder output from all 47 species
Ala_g24072	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.08	OrthoFinder output from all 47 species
Als_g39986	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Aop_g05123	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Aop_g14647	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
Aspi01Gene10489.t1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene24249.t1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Ceric.29G074000.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Ceric.35G052900.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000383.42	ATTSO2, TSO2	Nucleotide metabolism.deoxynucleotide...	0.01	OrthoFinder output from all 47 species
Cre12.g491050	ATTSO2, TSO2	Nucleotide metabolism.deoxynucleotide...	0.02	OrthoFinder output from all 47 species
Dac_g15408	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Dcu_g02437	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.08	OrthoFinder output from all 47 species
Dde_g42962	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.02	OrthoFinder output from all 47 species
Gb_41675	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	OrthoFinder output from all 47 species
Len_g12992	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Len_g16265	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Lfl_g16609	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Lfl_g38600	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.08	OrthoFinder output from all 47 species
MA_10430569g0010	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	OrthoFinder output from all 47 species
MA_1482g0010	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.07	OrthoFinder output from all 47 species
Mp1g09110.1	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	OrthoFinder output from all 47 species
Msp_g11511	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Msp_g42629	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Nbi_g12309	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.07	OrthoFinder output from all 47 species
Nbi_g13659	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Sam_g07065	No alias	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Spa_g09758	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Spa_g11227	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Spa_g11228	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.07	OrthoFinder output from all 47 species
Tin_g05900	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Tin_g15350	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Tin_g42059	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Zm00001e007693_P001	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	OrthoFinder output from all 47 species
Zm00001e030963_P001	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.06	OrthoFinder output from all 47 species
Zm00001e036749_P001	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009186	deoxyribonucleoside diphosphate metabolic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000247	C-8 sterol isomerase activity	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006696	ergosterol biosynthetic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
BP	GO:0008204	ergosterol metabolic process	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0044107	cellular alcohol metabolic process	IEP	HCCA
BP	GO:0044108	cellular alcohol biosynthetic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0097384	cellular lipid biosynthetic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1902652	secondary alcohol metabolic process	IEP	HCCA
BP	GO:1902653	secondary alcohol biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000358	RNR_small_fam	16	295

External Links

No external refs found!

AMTR_s00013p00179280 (ATTSO2, TSO2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation