AMTR_s00013p00054980 (HAP5A, NF-YC1,...)

Aliases : HAP5A, NF-YC1, ATHAP5A, evm_27.TU.AmTr_v1.0_scaffold00013.17

Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YC component

Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00013p00054980
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e001054_P002	HAP5A, NF-YC1,...	component NF-YC of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003958	CBFA_NFYB_domain	66	129

External Links

No external refs found!