1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00012p00263720

AMTR_s00012p00263720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.347

Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00263720

Target Alias Description ECC score Gene Family Method Actions
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.03 OrthoFinder output from all 47 species
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03368.1 LOC_Os07g03368 Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
Ore_g05518 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24153 No alias CAPE precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e032757_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 34 150
No external refs found!