AMTR_s00012p00212610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.150

No description available


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00212610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269120 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT1G77145 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
AT2G20670 No alias Protein of unknown function (DUF506) 0.04 OrthoFinder output from all 47 species
AT2G38820 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
AT2G39650 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Adi_g023073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g30375 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g31928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33568.t1 Aspi01Gene33568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025546 No alias not classified & original description: CDS=508-1674 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026352 No alias not classified & original description: CDS=79-1266 0.03 OrthoFinder output from all 47 species
Azfi_s0311.g064172 No alias not classified & original description: CDS=269-1747 0.01 OrthoFinder output from all 47 species
Cba_g04914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.04 OrthoFinder output from all 47 species
Ceric.01G087400.1 Ceric.01G087400 not classified & original description: pacid=50590838... 0.02 OrthoFinder output from all 47 species
Ceric.13G087300.1 Ceric.13G087300 not classified & original description: pacid=50636452... 0.03 OrthoFinder output from all 47 species
Ceric.13G087600.1 Ceric.13G087600 not classified & original description: pacid=50635474... 0.04 OrthoFinder output from all 47 species
Ceric.17G023400.1 Ceric.17G023400 not classified & original description: pacid=50618778... 0.03 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.01 OrthoFinder output from all 47 species
Dac_g04659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g43811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003141001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01005210001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01016558001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01026527001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030534001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036397001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_28132 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_30160 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_36122 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g54340.1 LOC_Os01g54340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g02311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431122g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_132127g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9190749g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001909 No alias not classified & original description: CDS=1-747 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020224 No alias not classified & original description: CDS=806-2086 0.04 OrthoFinder output from all 47 species
Sam_g11926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g006410.3.1 Solyc03g006410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc06g007580.1.1 Solyc06g007580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g053900.2.1 Solyc07g053900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004776_P001 Zm00001e004776 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e023428_P001 Zm00001e023428 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 44 245
No external refs found!