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  5. AMTR_s00012p00193110

AMTR_s00012p00193110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.125

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS24 component


Gene families : OG0000886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00012p00193110

Target Alias Description ECC score Gene Family Method Actions
AT3G04920 No alias Ribosomal protein S24e family protein 0.03 OrthoFinder output from all 47 species
Aob_g05584 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aob_g24530 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011184 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000361.64 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Gb_38272 No alias component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os01g52490.1 LOC_Os01g52490 component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_119841g0010 No alias component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
Ore_g31860 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g50017 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo271584 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Solyc06g084230.3.1 Solyc06g084230 component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc09g065330.3.1 Solyc09g065330 component RPS24 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g19361 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Tin_g29759 No alias component *(eS24) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e028203_P001 Zm00001e028203 component RPS24 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e030668_P001 Zm00001e030668 component RPS24 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
InterPro domains Description Start Stop
IPR001976 Ribosomal_S24e 25 107
No external refs found!