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  5. AMTR_s00012p00025360

AMTR_s00012p00025360 (AGD6,...)


Aliases : AGD6, evm_27.TU.AmTr_v1.0_scaffold00012.1

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein


Gene families : OG0003933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003933_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00012p00025360
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Ala_g02021 AGD6 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene26697.t2 ASP1, AGD7,... class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Cre09.g386550 ASP1, AGD7 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
GSVIVT01034212001 AGD6 Probable ADP-ribosylation factor GTPase-activating... 0.05 OrthoFinder output from all 47 species
MA_46769g0010 AGD6 class II ARF-GAP ARF-GTPase-activating protein 0.04 OrthoFinder output from all 47 species
Ore_g05696 ASP1, AGD7 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
Ore_g34065 ASP1, AGD7 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 5 101
No external refs found!