AMTR_s00011p00263200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.200

Description : Putative ripening-related protein 5 OS=Oryza sativa subsp. japonica


Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00263200

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00196350 evm_27.TU.AmTr_v1... Putative ripening-related protein 2 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.01 OrthoFinder output from all 47 species
AMTR_s00005p00209770 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
AMTR_s00005p00210680 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Aop_g39017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50260.t1 Aspi01Gene50260 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G075600.1 Ceric.32G075600 not classified & original description: pacid=50597647... 0.02 OrthoFinder output from all 47 species
Ceric.32G075700.1 Ceric.32G075700 not classified & original description: pacid=50597552... 0.03 OrthoFinder output from all 47 species
Dcu_g26186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09976 No alias Ripening-related protein grip22 OS=Vitis vinifera... 0.11 OrthoFinder output from all 47 species
LOC_Os10g34760.1 LOC_Os10g34760 Putative ripening-related protein 6 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
LOC_Os10g34770.1 LOC_Os10g34770 Putative ripening-related protein 7 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g44254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36089 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28256 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g28257 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g29187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35967 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g36438 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g36946 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g04962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g33994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g34399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!