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  5. AMTR_s00010p00263600

AMTR_s00010p00263600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.490

Description : (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana


Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00263600
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00208270 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00036p00060130 EDA17, HTH,... Cell wall.cutin and suberin.cuticular lipid... 0.05 OrthoFinder output from all 47 species
AT1G14190 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 OrthoFinder output from all 47 species
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 OrthoFinder output from all 47 species
AT3G56060 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 OrthoFinder output from all 47 species
AT5G51930 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 OrthoFinder output from all 47 species
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.05 OrthoFinder output from all 47 species
Aop_g28811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1527.g104149 No alias not classified & original description: CDS=163-1728 0.03 OrthoFinder output from all 47 species
Azfi_s2046.g108872 No alias not classified & original description: CDS=162-1706 0.03 OrthoFinder output from all 47 species
Cba_g67884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G018600.1 Ceric.10G018600 not classified & original description: pacid=50613331... 0.05 OrthoFinder output from all 47 species
Dcu_g44207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01010649001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01010650001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01013124001 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00808 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_00812 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_27931 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28422 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_39926 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39927 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_39928 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g45530.1 LOC_Os02g45530 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g02700.1 LOC_Os03g02700 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g48400.1 LOC_Os04g48400 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g31030.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species
LOC_Os09g19930.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.02 OrthoFinder output from all 47 species
Len_g59481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10041123g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_101600g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10307468g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10432967g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10433135g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_10434331g0010 EDA17, HTH Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434495g0020 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_115358g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_11792g0020 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_137064g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_138671g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_15634g0010 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_423598g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_9960869g0010 EDA17, HTH Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g43877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16242 EDA17, HTH not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo108291 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo153538 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo232555 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo413925 No alias (R)-mandelonitrile lyase 2 OS=Prunus serotina 0.02 OrthoFinder output from all 47 species
Smo422534 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc08g080190.4.1 Solyc08g080190 Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g05899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004200_P002 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.06 OrthoFinder output from all 47 species
Zm00001e015434_P001 Zm00001e015434 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e030422_P001 Zm00001e030422 (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 218 320
No external refs found!