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  5. AMTR_s00010p00262670

AMTR_s00010p00262670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.474

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP


Gene families : OG0004137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00262670

Target Alias Description ECC score Gene Family Method Actions
AT1G74470 No alias Pyridine nucleotide-disulphide oxidoreductase family protein 0.06 OrthoFinder output from all 47 species
Adi_g056383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g056384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114339 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07828 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06864 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G039000.1 Ceric.02G039000 geranylgeranyl reductase *(CHLP) & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g050950 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Dcu_g02816 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g24648 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g51080.1 LOC_Os02g51080 geranylgeranyl reductase (ChlP) 0.03 OrthoFinder output from all 47 species
Len_g03280 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11797 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g07857 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g115980.1.1 Solyc03g115980 geranylgeranyl reductase (ChlP) 0.04 OrthoFinder output from all 47 species
Spa_g40506 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015812_P003 Zm00001e015812 geranylgeranyl reductase (ChlP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR023753 FAD/NAD-binding_dom 105 266
No external refs found!